The quantity of freight traffic on the Boston and Lowell Railroad was large from the start (as was expected) with Lowell's textile companies bringing in raw materials and sending out finished goods. The high level of passenger traffic, however, was not anticipated. Trains traveled on unwelded rails which were laid on a granite roadbed, which made for an extremely bumpy ride. The railroad switched to wooden ties.
The Boston and Lowell was faced with a new problem; it had a reputation for speed which made it very popular and highly competitive with stagecoaches. Many people wanted to go not only from Lowell to Boston but to places in between. The Boston and Lowell ordered another locomotive and cars for local passenger rail in 1842, and had them make six stops along the route. Passenger rail proved to be almost as profitable as freight.
The main part of the Southern Division was the mainline between Boston and Lowell.
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The Charlestown Branch Railroad was not itself taken over by the B&L, but as originally built in 1840 it was a short spur from the B&L to wharves in Charlestown. In 1845 the Fitchburg Railroad leased it and incorporated it into their main line.
Mystic River
The Mystic River Branch served the Mystic River waterfront on the north side of Charlestown.
Woburn Loop
The Woburn Branch Railroad (a.k.a. the Woburn Loop) opened in 1844, connecting Woburn to the main line towards Boston. The Horn Pond Branch Railroad was a short freight-only branch off the Woburn Branch to ice houses on Horn Pond. The northern loop, built in 1885, continued the line back north to the main line at North Woburn Jct. in South Wilmington. The Horn Pond branch line was abandoned in 1911, the northern loop in 1961, and the original line in 1982.
Stoneham
The Stoneham Branch Railroad was built in 1862 to connect to Stoneham.
Lowell and Lawrence
The Lowell and Lawrence Railroad was chartered in 1846 to build a line between Lowell and Lawrence, which opened in 1848. In 1858 the B&L leased the line.
Salem and Lowell
The Salem and Lowell Railroad was chartered in 1848 as a branch from the Lowell and Lawrence at Tewksbury Junction to the Essex Railroad at Peabody, along which it used trackage rights to Salem. The line was opened in 1850 and operated by the Lowell and Lawrence until 1858, when the B&L leased it along with the Lowell and Lawrence.
Wilmington (Wildcat) Branch
The Wilmington Branch, now known as the Wildcat Branch, was built just west of the original Boston and Maine Railroad alignment to connect the main line at Wilmington to the Salem and Lowell at Wilmington Junction, providing a shorter route between Boston and Lawrence.
Lexington and Arlington (Middlesex Central Railroad)
The Lexington and West Cambridge Railroad was chartered in 1845 and opened in 1846, connecting the Fitchburg Railroad at West Cambridge to Lexington, although the "West Cambridge" in the name referred to what is now the town of Arlington. It was operated by the Fitchburg from opening, and leased to the Fitchburg from 1847 to 1859. The line was reorganized as the Lexington and Arlington Railroad in 1868, following the renaming of Arlington. The B&L bought the line in 1870 and built a new connection to their main line at Somerville Junction.
The Middlesex Central Railroad was chartered in 1872 and opened in 1873, extending the line from Lexington to Concord. It was leased from completion to the B&L. An extension west to the Nashua, Acton and Boston Railroad at Middlesex Junction was built in 1879.
Billerica and Bedford
The Billerica and Bedford Railroad was built in 1877 as a narrow gauge line between the Middlesex Central at Bedford and the B&L at North Billerica. It was sold and abandoned in 1878, and the rails were taken to Maine for the Sandy River Railroad. A new standard gauge branch was built by the B&L in 1885, mostly on the same right-of-way.
Lowell and Nashua
The Lowell and Nashua Railroad was chartered in 1836 as an extension of the B&L from Lowell north to the New Hampshire state line. The Nashua and Lowell Railroad, chartered in 1835, would continue the line in New Hampshire to Nashua. The two companies merged in 1838 to form a new Nashua and Lowell Railroad, and the road opened later that year. In 1857 the B&L and N&L agreed to operate as one company from 1860, and in 1880 the B&L leased the N&L.
Stony Brook
The Stony Brook Railroad was chartered in 1845 and opened in 1848, connecting the Nashua and Lowell at North Chelmsford with Ayer. The N&L leased the Stony Brook in 1848.
Nashua to Keene
The Wilton Railroad was chartered in 1844. It opened a line from Nashua west to Danforth's Corner in 1848, to Milford in 1850 and to East Wilton in 1851. Since completion it was operated by the N&L.
The Peterborough Railroad was chartered in 1866 to continue the Wilton Railroad northwest to Greenfield, New Hampshire. In 1873 the N&L leased it; the road opened in 1874.
The Manchester and Keene Railroad was chartered in 1864 and opened in 1878, continuing the Peterborough Railroad west from Greenfield to the Connecticut River Railroad in Keene. In 1880 the company went bankrupt, and it was operated by the Connecticut River Railroad until 1882, when it was bought half-and-half by the B&L and the Concord Railroad.
Other divisions
Central Massachusetts Railroad
The Massachusetts Central Railroad was chartered in 1869 to build a line east–west across the middle of the state, between the Boston and Albany Railroad and the Fitchburg Railroad. The first section opened in 1881, splitting from the B&L's Lexington and Arlington Branch at North Cambridge Junction, and the company was reorganized as the Central Massachusetts Railroad in 1883. The B&L leased the line in 1886, a year before the B&M leased the B&L.
Northern Division
The Boston, Concord and Montreal Railroad was chartered in 1844, and opened in stages from 1848 to 1853, eventually running from Concord to Woodsville, New Hampshire. That railroad, along with its branches, became part of the B&L Northern Division in 1884, when the B&L leased the BC&M.
The Northern Railroad was also chartered in 1844, opening in 1847 from Concord to Lebanon, New Hampshire, and later extending to White River Junction, Vermont. The B&L leased it in 1884 as another part of its Northern Division.
The only connection between the Southern and Northern divisions was at Hancock Junction, where the Manchester and Keene Railroad (Southern) and Peterborough and Hillsborough Railroad (Northern) met.
In 1889 the BC&M merged with the Concord Railroad to form the Concord and Montreal Railroad, taking it out of B&M control until 1895, when the B&M leased the C&M.
White Mountains Division
The White Mountains Railroad was chartered in 1848 and opened a line from Woodsville to Littleton, New Hampshire, in 1853. Along with extensions and branches, it was leased to the Boston, Concord and Montreal Railroad in 1859 and consolidated into it in 1872, becoming its White Mountains Division. In 1884 the B&L leased the BC&M and the old White Mountains Railroad became the B&L's White Mountains Division.
The Northern and White Mountains Divisions were connected at Woodsville.
Vermont Division
The Essex County Railroad (chartered 1864), Montpelier and St. Johnsbury Railroad (chartered 1866) and Lamoille Valley Railroad (chartered 1867) were consolidated into the Portland and Ogdensburg Railroad in 1875 as their Vermont Division. The line was finished in 1877, and in 1880 it was reorganized as the St. Johnsbury and Lake Champlain Railroad, which was taken over by the B&L as their Vermont Division. The line did not stay in the B&M system, and the easternmost part was leased to the Maine Central Railroad in 1912.
The White Mountains and Vermont Divisions were connected at Scott's Mills, New Hampshire.
Passumpsic Division
The Connecticut and Passumpsic Rivers Railroad was organized in 1846 and opened a line from White River Junction on the Northern Railroad to the border with Quebec, Canada, in 1867, junctioning the Northern and White Mountains Divisions at Wells River and the Vermont Division at St. Johnsbury. The Massawippi Valley Railway, leased in 1870, continued to Sherbrooke, Quebec, where it junctioned the Grand Trunk Railway among others. The B&L leased the line on January 1, 1887, three months before the B&M acquired the B&L.